Arabidopsis thaliana genome (includes TAIR genome version 6, Gene Ontology July 2006 and Brassica homologies)

Instructions Instructions Search using a sequence name, gene name, locus, oligonucleotide (15 bp minimum), or other landmark. The wildcard character * is allowed. To center on a location, click the ruler. Use the Scroll/Zoom buttons to change magnification and position. Examples: 1, 2, 3, 4, 5, M, C, 1:97,000..117,000, 2:102,000..112,000, 1:11127000..11147000, At2g26800.1, apetala1, homeotic, flowering, CEN1, FCA, F4N2, F4N, MGT_3.6639, MGT6639, CGAATTCAATAGAATG, CGAATTCAATAGAAT, RNA:*, JAtY57D19, KBrB017B11, CX190453, GO:0005215.
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Instructions

Search using a sequence name, gene name, locus, oligonucleotide (15 bp minimum), or other landmark. The wildcard character * is allowed. To center on a location, click the ruler. Use the Scroll/Zoom buttons to change magnification and position.

Examples: 1, 2, 3, 4, 5, M, C, 1:97,000..117,000, 2:102,000..112,000, 1:11127000..11147000, At2g26800.1, apetala1, homeotic, flowering, CEN1, FCA, F4N2, F4N*, MGT_3.6639*, MGT*6639*, CGAATTCAATAGAATG, CGAATTCAATAGAAT, RNA:*, JAtY57D19, KBrB017B11, CX190453, GO:0005215.

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Generic genome browser version 1.65

Homologous Brassica BAC clones	Homologous Brassica ESTs
Homologous Brassica BACends	Homologous Brassica GSSs

6-frame-translation	DNA/GC Content	Insertions in Columbia	Microarray ATH1-121501 probes	Transcript
Arabidopsis ESTs and cDNAs	Gene Region (Transcription Unit)	Insertions in Landsberg erecta	Non-protein coding genes (RNA Genes)	Untranslated regions of protein coding genes
CATMA primers	Gene Traps with GUS patterns	Insertions in Wassilewskija	overview
Clone sequence regions	Insertions in all ecotypes (T-DNA or transposon flanking sequence)	JAtY Clone Library	Pseudogenes

HMBD col BU/UB	mCIP col/ddc BU	mCIP ddc BU/UB	mCIP met1 BU/UB
mCIP col BU/UB	mCIP col/met1 BU	mCIP ddc/col BU	mCIP met1/col BU

Image Width 450 640 800 1024 1280 1600	Key position Between Beneath Left Right	Track Name Table Alphabetic Varying
Highlight feature(s) (feature1 feature2...)	Highlight regions (region1:start..end region2:start..end)	Show grid